街道级别图像对原位数据收集进行扩大占据了重要潜力。通过组合使用便宜的高质量相机与最近的深度学习计算解决方案的进步来实现这一点,以推导出相关专题信息。我们介绍了一个框架,用于使用计算机视觉从街道层图像中收集和提取作物类型和候选信息。在2018年生长季节期间,高清图片被捕获在荷兰弗莱洛兰省的侧视动作相机。每个月从3月到10月,调查了一个固定的200公里路线,每秒收集一张照片,结果总计40万个地理标记的图片。在220个特定的包裹物位置,记录了现场作物的观察结果,以获得17种作物。此外,时间跨度包括特定的出苗前包裹阶段,例如用于春季和夏季作物的不同栽培的裸土,以及收获后栽培实践,例如,绿色皱眉和捕捉庄稼。基于与卷积神经网络(MobileNet)的转移学习,使用具有众所周知的图像识别模型的Tensorflow进行分类。开发了一种超核解方法,以获得160型号的表现最佳模型。这种最佳模型应用于独立推理的鉴别作物类型,宏观F1分数为88.1%的宏观效果,在包裹水平的86.9%。讨论了这种方法的潜力和警告以及实施和改进的实际考虑因素。所提出的框架速度升高了高质量的原位数据收集,并通过使用计算机视觉自动分类建议大规模数据收集的途径。
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由于结构化数据通常不足,因此在开发用于临床信息检索和决策支持系统模型时,需要从电子健康记录中的自由文本中提取标签。临床文本中最重要的上下文特性之一是否定,这表明没有发现。我们旨在通过比较荷兰临床注释中的三种否定检测方法来改善标签的大规模提取。我们使用Erasmus医疗中心荷兰临床语料库比较了基于ContextD的基于规则的方法,即使用MEDCAT和(Fineted)基于Roberta的模型的BilstM模型。我们发现,Bilstm和Roberta模型都在F1得分,精度和召回方面始终优于基于规则的模型。此外,我们将每个模型的分类错误系统地分类,这些错误可用于进一步改善特定应用程序的模型性能。在性能方面,将三个模型结合起来并不有益。我们得出的结论是,尤其是基于Bilstm和Roberta的模型在检测临床否定方面非常准确,但是最终,根据手头的用例,这三种方法最终都可以可行。
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We present the interpretable meta neural ordinary differential equation (iMODE) method to rapidly learn generalizable (i.e., not parameter-specific) dynamics from trajectories of multiple dynamical systems that vary in their physical parameters. The iMODE method learns meta-knowledge, the functional variations of the force field of dynamical system instances without knowing the physical parameters, by adopting a bi-level optimization framework: an outer level capturing the common force field form among studied dynamical system instances and an inner level adapting to individual system instances. A priori physical knowledge can be conveniently embedded in the neural network architecture as inductive bias, such as conservative force field and Euclidean symmetry. With the learned meta-knowledge, iMODE can model an unseen system within seconds, and inversely reveal knowledge on the physical parameters of a system, or as a Neural Gauge to "measure" the physical parameters of an unseen system with observed trajectories. We test the validity of the iMODE method on bistable, double pendulum, Van der Pol, Slinky, and reaction-diffusion systems.
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Recent advancements in sensing and communication facilitate obtaining high-frequency real-time data from various physical systems like power networks, climate systems, biological networks, etc. However, since the data are recorded by physical sensors, it is natural that the obtained data is corrupted by measurement noise. In this paper, we present a novel algorithm for online real-time learning of dynamical systems from noisy time-series data, which employs the Robust Koopman operator framework to mitigate the effect of measurement noise. The proposed algorithm has three main advantages: a) it allows for online real-time monitoring of a dynamical system; b) it obtains a linear representation of the underlying dynamical system, thus enabling the user to use linear systems theory for analysis and control of the system; c) it is computationally fast and less intensive than the popular Extended Dynamic Mode Decomposition (EDMD) algorithm. We illustrate the efficiency of the proposed algorithm by applying it to identify the Van der Pol oscillator, the IEEE 68 bus system, and a ring network of Van der Pol oscillators.
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We introduce PRISM, a method for real-time filtering in a probabilistic generative model of agent motion and visual perception. Previous approaches either lack uncertainty estimates for the map and agent state, do not run in real-time, do not have a dense scene representation or do not model agent dynamics. Our solution reconciles all of these aspects. We start from a predefined state-space model which combines differentiable rendering and 6-DoF dynamics. Probabilistic inference in this model amounts to simultaneous localisation and mapping (SLAM) and is intractable. We use a series of approximations to Bayesian inference to arrive at probabilistic map and state estimates. We take advantage of well-established methods and closed-form updates, preserving accuracy and enabling real-time capability. The proposed solution runs at 10Hz real-time and is similarly accurate to state-of-the-art SLAM in small to medium-sized indoor environments, with high-speed UAV and handheld camera agents (Blackbird, EuRoC and TUM-RGBD).
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Strategic test allocation plays a major role in the control of both emerging and existing pandemics (e.g., COVID-19, HIV). Widespread testing supports effective epidemic control by (1) reducing transmission via identifying cases, and (2) tracking outbreak dynamics to inform targeted interventions. However, infectious disease surveillance presents unique statistical challenges. For instance, the true outcome of interest - one's positive infectious status, is often a latent variable. In addition, presence of both network and temporal dependence reduces the data to a single observation. As testing entire populations regularly is neither efficient nor feasible, standard approaches to testing recommend simple rule-based testing strategies (e.g., symptom based, contact tracing), without taking into account individual risk. In this work, we study an adaptive sequential design involving n individuals over a period of {\tau} time-steps, which allows for unspecified dependence among individuals and across time. Our causal target parameter is the mean latent outcome we would have obtained after one time-step, if, starting at time t given the observed past, we had carried out a stochastic intervention that maximizes the outcome under a resource constraint. We propose an Online Super Learner for adaptive sequential surveillance that learns the optimal choice of tests strategies over time while adapting to the current state of the outbreak. Relying on a series of working models, the proposed method learns across samples, through time, or both: based on the underlying (unknown) structure in the data. We present an identification result for the latent outcome in terms of the observed data, and demonstrate the superior performance of the proposed strategy in a simulation modeling a residential university environment during the COVID-19 pandemic.
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Causal deep learning (CDL) is a new and important research area in the larger field of machine learning. With CDL, researchers aim to structure and encode causal knowledge in the extremely flexible representation space of deep learning models. Doing so will lead to more informed, robust, and general predictions and inference -- which is important! However, CDL is still in its infancy. For example, it is not clear how we ought to compare different methods as they are so different in their output, the way they encode causal knowledge, or even how they represent this knowledge. This is a living paper that categorises methods in causal deep learning beyond Pearl's ladder of causation. We refine the rungs in Pearl's ladder, while also adding a separate dimension that categorises the parametric assumptions of both input and representation, arriving at the map of causal deep learning. Our map covers machine learning disciplines such as supervised learning, reinforcement learning, generative modelling and beyond. Our paradigm is a tool which helps researchers to: find benchmarks, compare methods, and most importantly: identify research gaps. With this work we aim to structure the avalanche of papers being published on causal deep learning. While papers on the topic are being published daily, our map remains fixed. We open-source our map for others to use as they see fit: perhaps to offer guidance in a related works section, or to better highlight the contribution of their paper.
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Front-door adjustment is a classic technique to estimate causal effects from a specified directed acyclic graph (DAG) and observed data. The advantage of this approach is that it uses observed mediators to identify causal effects, which is possible even in the presence of unobserved confounding. While the statistical properties of the front-door estimation are quite well understood, its algorithmic aspects remained unexplored for a long time. Recently, Jeong, Tian, and Barenboim [NeurIPS 2022] have presented the first polynomial-time algorithm for finding sets satisfying the front-door criterion in a given DAG, with an $O(n^3(n+m))$ run time, where $n$ denotes the number of variables and $m$ the number of edges of the graph. In our work, we give the first linear-time, i.e. $O(n+m)$, algorithm for this task, which thus reaches the asymptotically optimal time complexity, as the size of the input is $\Omega(n+m)$. We also provide an algorithm to enumerate all front-door adjustment sets in a given DAG with delay $O(n(n + m))$. These results improve the algorithms by Jeong et al. [2022] for the two tasks by a factor of $n^3$, respectively.
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Multi-robot manipulation tasks involve various control entities that can be separated into dynamically independent parts. A typical example of such real-world tasks is dual-arm manipulation. Learning to naively solve such tasks with reinforcement learning is often unfeasible due to the sample complexity and exploration requirements growing with the dimensionality of the action and state spaces. Instead, we would like to handle such environments as multi-agent systems and have several agents control parts of the whole. However, decentralizing the generation of actions requires coordination across agents through a channel limited to information central to the task. This paper proposes an approach to coordinating multi-robot manipulation through learned latent action spaces that are shared across different agents. We validate our method in simulated multi-robot manipulation tasks and demonstrate improvement over previous baselines in terms of sample efficiency and learning performance.
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Bayesian Optimization is a useful tool for experiment design. Unfortunately, the classical, sequential setting of Bayesian Optimization does not translate well into laboratory experiments, for instance battery design, where measurements may come from different sources and their evaluations may require significant waiting times. Multi-fidelity Bayesian Optimization addresses the setting with measurements from different sources. Asynchronous batch Bayesian Optimization provides a framework to select new experiments before the results of the prior experiments are revealed. This paper proposes an algorithm combining multi-fidelity and asynchronous batch methods. We empirically study the algorithm behavior, and show it can outperform single-fidelity batch methods and multi-fidelity sequential methods. As an application, we consider designing electrode materials for optimal performance in pouch cells using experiments with coin cells to approximate battery performance.
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